BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016C11SP1|AL426989
(511 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig146 645 0.0
>3x_Contig146
Length = 1181
Score = 645 bits (312), Expect = 0.0
Identities = 387/430 (90%), Gaps = 1/430 (0%)
Strand = Plus / Minus
Query: 1 atccaatcttccaagttgtggaacaaccaatggaaacaacaattgcaaggcaagagaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 atccaatcttccaagttgtggaacaaccaatggaaacaacaattgcaaggcaagagaaga 497
Query: 61 cgttcaaatgttgatgctgtggatgctgcctcagctgcctcagcttcagataccgaatct 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 496 cgttcaaatgttgatgctgttgatgctgcctcagctgcctcagcttcagataccgaatct 437
Query: 121 gcaacaacaacgactacagcaactgctgctactggatatgkgakckcgatgagaagckgt 180
|||||||||||||||||||||||||||||||||||||||| || | ||||||||||| ||
Sbjct: 436 gcaacaacaacgactacagcaactgctgctactggatatgtgatctcgatgagaagctgt 377
Query: 181 gtttgtktaaacaacatggcatcgatatkgaacatgattgaggaagtagagaaaagtktc 240
|||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||| ||
Sbjct: 376 gtttgtttaaacaacatggcatcgatattgaacatgattgatgaagtagagaaaagtttc 317
Query: 241 caatkaaaccaattgagkgaagaagtacgtgctcacgtgaccgasgacaacaataagara 300
|||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 316 caattaaaccaattgagtgaagaagtacgtgctcacgtgaccgacgacaacaataagaaa 257
Query: 301 akcaaagcggggatgragggccaatggkgggcaakagtgccgggagccgccgragg-gck 359
| |||| ||| ||| ||||||||| | || ||| ||| ||| |||||||| ||| ||
Sbjct: 256 atcaaatcggagattaagggccaattgtggtcaatagttccgatagccgccgaaggtgct 197
Query: 360 cctkgcgtcggcggaraggrtaassagagccccagagacagkkkgksaakggtsggcacg 419
||| ||||||||||| ||| ||| ||||||||||| |||| | || || | ||||
Sbjct: 196 ccttgcgtcggcggaaaggataaccagagccccagatacagtttgtcaattgtcgacacg 137
Query: 420 gccaagcggc 429
||||||||||
Sbjct: 136 gccaagcggc 127
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.43 0.720 1.35
Gapped
Lambda K H
1.43 0.720 1.35
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4533
Number of Sequences: 1807
Number of extensions: 4533
Number of successful extensions: 1220
Number of sequences better than 1.0e-20: 1
length of query: 511
length of database: 10,358,551
effective HSP length: 16
effective length of query: 495
effective length of database: 10,329,639
effective search space: 5113171305
effective search space used: 5113171305
T: 0
A: 40
X1: 5 (10.3 bits)
X2: 14 (29.0 bits)
S1: 11 (23.2 bits)
S2: 48 (99.7 bits)